|
/ . / Intersurf / Intersurf.py
|
Functions
|
|
|
|
getHistogramColor
|
getHistogramColor ( x, markers )
|
|
|
commandLine
|
commandLine ( cmd, args )
Midas command line parsing and execution
|
Exceptions
|
|
|
LimitationError( "intersurf color not available yet" )
|
|
|
|
cmdSurface
|
cmdSurface (
refSel,
matchSel,
pairing=None,
solid=None,
track=None,
select=None,
bias=None,
prune=None,
)
|
Exceptions
|
|
|
UserError("%d reference molecules selected " "(must be 1)" % len( refMols ) )
UserError("%d match chains selected " "(must be 1)" % len( matchChains ) )
UserError("%d reference chains selected " "(must be 1)" % len( refChains ) )
UserError( "bias must be between 0 and 1" )
UserError( "unknown pairing method: %s" % pairing )
UserError("%d match molecules selected " "(must be 1)" % len( matchMols ) )
|
|
|
|
restoreSession
|
restoreSession ( state )
|
|
|
interpolate
|
interpolate (
position,
marker1,
marker2,
col1,
col2,
)
|
|
|
makeBars
|
makeBars ( numBins, data )
|
|
|
getDistance
|
getDistance ( a, b )
|
|
|
makeSurface
|
makeSurface (
target,
solid,
track,
select,
bias,
prune,
pruneDistance,
)
|
|
|