<html><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class="">Hi Antonio,<div class=""><br class=""></div><div class=""> Glad to hear the new Chimera 1.16 version is working.</div><div class=""><br class=""></div><div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>Tom</div><div class=""><br class=""><div><br class=""><blockquote type="cite" class=""><div class="">On Jun 1, 2022, at 3:25 AM, Antonio Díaz Quintana <<a href="mailto:antonio.diaz@iiq.csic.es" class="">antonio.diaz@iiq.csic.es</a>> wrote:</div><br class="Apple-interchange-newline"><div class="">
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" class="">
<div class=""><p class="">Hello Tom,</p><p class="">Thankyou. It worked.</p><p class="">Best,</p><p class="">Antonio<br class="">
</p>
<div class="moz-cite-prefix">El 01/06/2022 a las 07:07, Tom Goddard
escribió:<br class="">
</div>
<blockquote type="cite" cite="mid:9138DD51-DED5-46AD-9EE6-5A4528D05D47@sonic.net" class="">
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Hi Antonio,
<div class=""><br class="">
</div>
<div class="">The error "<i class="">ImportError: No module named
replyobj" </i><span class="" style="font-style: normal;">means
Chimera cannot find its message logging module called
"replyobj". That suggests that your Chimera installation is
broken, and does not appear to be a problem specifically with
BLAST. I would suggest installing the current Chimera version
1.16.</span>
<div class=""><br class="">
</div>
<div class="">If that does not fix it, use the Report a Bug...
button that should appear when this error message is shown.
Or if that button does not appear use Chimera menu entry Help
/ Report a Bug....<br class="">
<div class=""><br class="">
</div>
<div class=""><span class="Apple-tab-span" style="white-space:pre"> </span>Tom</div>
<div class=""><br class="">
<div class=""><br class="">
<blockquote type="cite" class="">
<div class="">On May 31, 2022, at 8:05 AM, Antonio Díaz
Quintana via Chimera-users <<a href="mailto:chimera-users@cgl.ucsf.edu" class="moz-txt-link-freetext" moz-do-not-send="true">chimera-users@cgl.ucsf.edu</a>>
wrote:</div>
<br class="Apple-interchange-newline">
<div class="">
<meta http-equiv="content-type" content="text/html;
charset=UTF-8" class="">
<div class=""><p class="">Dear all, <br class="">
</p><p class="">Recently, I stopped being able to
perform a BLAST search from the SEQUENCE tool in
UCSF Chimera. Is there anything I could do to fix
this?<br class="">
</p><p class="">Log message follows:</p><p class=""><i class="">Web Service: BlastProtein2
is a Python wrapper that calls blastp to search
nr or pdb for sequences similar to the given
protein sequence</i><i class=""><br class="">
</i><i class="">Opal service URL: <a class="moz-txt-link-freetext" href="http://webservices.rbvi.ucsf.edu/opal2/services/BlastProtein2Service" moz-do-not-send="true">http://webservices.rbvi.ucsf.edu/opal2/services/BlastProtein2Service</a></i><i class=""><br class="">
</i><i class="">Opal job URL:
<a class="moz-txt-link-freetext" href="http://webservices.rbvi.ucsf.edu/appBlastProtein2Service16540092552761301435050" moz-do-not-send="true">http://webservices.rbvi.ucsf.edu/appBlastProtein2Service16540092552761301435050</a></i><i class=""><br class="">
</i><i class="">Traceback (most recent call last):</i><i class=""><br class="">
</i><i class=""> File "C:\Program Files\Chimera
1.15rc\share\chimera\tasks.py", line 179, in
runStatusCB</i><i class=""><br class="">
</i><i class=""> task.statusCBList[0]()</i><i class=""><br class="">
</i><i class=""> File "C:\Program Files\Chimera
1.15rc\share\blastpdb\ParserBlastP.py", line
434, in _statusCB</i><i class=""><br class="">
</i><i class=""> self.finishCB(self.params,
output)</i><i class=""><br class="">
</i><i class=""> File "C:\Program Files\Chimera
1.15rc\share\blastpdb\gui.py", line 424, in
_finish</i><i class=""><br class="">
</i><i class=""> self.fetchColumnValues()</i><i class=""><br class="">
</i><i class=""> File "C:\Program Files\Chimera
1.15rc\share\blastpdb\gui.py", line 449, in
fetchColumnValues</i><i class=""><br class="">
</i><i class=""> info = fetch_pdb_info(pdb_ids)</i><i class=""><br class="">
</i><i class=""> File "C:\Program Files\Chimera
1.15rc\share\blastpdb\pdbinfo.py", line 151, in
fetch_pdb_info</i><i class=""><br class="">
</i><i class=""> import replyobj</i><i class=""><br class="">
</i><i class="">ImportError: No module named
replyobj</i><br class="">
</p><p class="">Best,</p><p class="">Antonio<br class="">
</p>
<pre class="moz-signature" cols="72">--
Dr. Antonio J. Díaz Quintana
Instituto de Investigaciones Químicas
Universidad de Sevilla - CSIC
Avda. Americo Vespucio 49
41092 Sevilla
Spain
Phone: +34 954 48 9631</pre>
</div>
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Manage subscription: <a href="https://www.rbvi.ucsf.edu/mailman/listinfo/chimera-users" class="moz-txt-link-freetext" moz-do-not-send="true">https://www.rbvi.ucsf.edu/mailman/listinfo/chimera-users</a><br class="">
</div>
</blockquote>
</div>
<br class="">
</div>
</div>
</div>
</blockquote>
<pre class="moz-signature" cols="72">--
Dr. Antonio J. Díaz Quintana
Instituto de Investigaciones Químicas
Universidad de Sevilla - CSIC
Avda. Americo Vespucio 49
41092 Sevilla
Spain
Phone: +34 954 48 9631</pre>
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