<html><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; margin: 0px;" class=""><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif; color: rgb(127, 127, 127);" class=""><b class="">From:<span class="Apple-converted-space"> </span></b></span><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif;" class="">"Jan Gebauer" <<a href="mailto:jan.gebauer@uni-koeln.de" class="">jan.gebauer@uni-koeln.de</a>><br class=""></span></div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; margin: 0px;" class=""><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif; color: rgb(127, 127, 127);" class=""><b class="">Subject:<span class="Apple-converted-space"> </span></b></span><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif;" class=""><b class="">Identifying residues based on PAE plot?</b><br class=""></span></div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; margin: 0px;" class=""><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif; color: rgb(127, 127, 127);" class=""><b class="">Date:<span class="Apple-converted-space"> </span></b></span><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif;" class="">April 27, 2022 at 3:04:30 AM PDT<br class=""></span></div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; margin: 0px;" class=""><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif; color: rgb(127, 127, 127);" class=""><b class="">To:<span class="Apple-converted-space"> </span></b></span><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif;" class="">ChimeraX-users <<a href="mailto:chimerax-users-bounces@cgl.ucsf.edu" class="">chimerax-users-bounces@cgl.ucsf.edu</a>><br class=""></span></div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; margin: 0px;" class=""><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif; color: rgb(127, 127, 127);" class=""><b class="">Reply-To:<span class="Apple-converted-space"> </span></b></span><span style="font-family: -webkit-system-font, "Helvetica Neue", Helvetica, sans-serif;" class="">"Jan Gebauer" <<a href="mailto:jan.gebauer@uni-koeln.de" class="">jan.gebauer@uni-koeln.de</a>><br class=""></span></div><br style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><br style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">Hi everyone,</div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><br class=""></div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">love the "new" work in the dailys for ChimeraX and visualising the PAE and pLDTT scores. As I calculate my AF structures on my own, this helps a lot to analyses the structures.</div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><br class=""></div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">I have one question/suggestion however: If I select a region in the PAE plot, it gets coloured in the the "3D-view", however, I found no way to actually get the residues number or a proper selection for the coloured residues. Is there a way? I'd like to colour multiple selections differently...</div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">Another nice feature would be a pLDTT plot, as this enables easier detection of unordered stretches...</div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><br class=""></div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">As always: Many thanks for all the good work!</div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><br class=""></div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">Best</div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class="">Jan</div><div style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><br class=""></div><div id="signature_old" style="caret-color: rgb(0, 0, 0); font-family: "Segoe UI"; font-size: 16px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><div id="xb7454239a230424" class=""><pre class="moz-signature" cols="72"><div id="xcae1d71cca764e2b8f46e025f75da513" class=""><div class="plain_line">--</div><div class="plain_line"><font face="Bahnschrift Light" class="">Dr. Jan Gebauer <span style="background-color: rgba(0, 0, 0, 0); font-size: 12pt;" class="">|</span><span style="font-size: 12pt;" class=""> π Head of C2<i class="">f</i> </span><span style="background-color: rgba(0, 0, 0, 0); font-size: 12pt;" class="">|</span><span style="font-size: 12pt;" class="">π¬ Member of AG Prof. Baumann
</span></font></div><div class="plain_line"><font face="Bahnschrift Light" class="">Institut fΓΌr Biochemie | University of Cologne</font></div><div class="plain_line"><font face="Bahnschrift Light" class="">Zuelpicher Str. 47 | 50674 Cologne | Germany</font></div><div class="plain_line"><font face="Bahnschrift Light" class="">π +49 (221) 470 3212 π Fax: +49 (221 470 5066)</font></div><div class="plain_line"><font face="Bahnschrift Light" class="">π§ <a href="mailto:jan.gebauer@uni-koeln.de" class="">jan.gebauer@uni-koeln.de</a> π<a href="http://px.uni-koeln.de/" class="">http://px.uni-koeln.de/</a> </font></div><div class="plain_line"><span style="background-color: rgba(0, 0, 0, 0); font-family: "Bahnschrift Light";" class="">πVisit the Cologne Crystallisation facility (C2f) !</span><span style="background-color: rgba(0, 0, 0, 0); font-size: 12pt; font-family: "Bahnschrift Light";" class="">π</span><a href="http://c2f.uni-koeln.de/" style="background-color: rgba(0, 0, 0, 0); font-size: 12pt; font-family: "Bahnschrift Light";" class="">http://c2f.uni-koeln.de/</a></div></div></pre></div></div></body></html>