<html><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div dir="auto" style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div class="">Dear all,</div><div class=""><br class=""></div><div class="">I saved two sessions with different data to make a movie using the same command lines. However, I am not able to obtain the same result when I use the command volume region.</div><div class=""><br class=""></div><div class="">In one instance Chimerax renders the whole 3D volumes I selected with “volume #x-y region all". In a second session, with different data but virtually the same commands, the rendering halts at the step before (~disp #1). I am puzzled because in both instances the logs show the command “volume #x-y region all” as executed. And, in the “faulty session" if I manually input the same command that I passed through the script it eventually shows the complete regions of the volumes. </div><div class=""><br class=""></div><div class="">Could you please help me to understand what am I doing wrong? I am using ChimeraX 1.4 on Linux. I am pasting here the piece of the scripts that work and do not respectively,</div><div class=""><br class=""></div><div class="">Many thanks in advance,</div><div class=""><br class=""></div><div class="">Edoardo</div><div class=""><br class=""></div><div class=""><font color="#00fa00" class="">Working</font></div><div class="">fly p2 p1 100; wait; </div><div class="">volume #2 show style surface level 0.8 color #5555ff;</div><div class="">volume #3 show style surface level 0.8 color #aa557f;</div><div class="">volume #4 show style surface level 0.8 color #f514fd;</div><div class="">volume #5 show style surface level 0.8 color #11ffcc;</div><div class="">volume #6 show style surface level 0.8 color #ff9429;</div><div class="">volume #2-6 transparency 0.8; </div><div class="">wait 20;</div><div class="">volume all planes z,1344,60; wait 1284; </div><div class="">~disp #1; </div><div class="">volume #2-6 region all; </div><div class=""><br class=""></div><div class=""><font color="#ff2600" class="">Faulty</font></div><div class="">fly p1 p2 100; wait;</div><div class=""> volume #2 show style surface level 0.8 color #5555ff;</div><div class="">volume #3 show style surface level 0.8 color #aa557f;</div><div class="">volume #4 show style surface level 0.8 color #f514fd;</div><div class="">volume #5 show style surface level 0.8 color #11ffcc;</div><div class="">volume #2-5 transparency 0.5; </div><div class="">wait 20;</div><div class="">volume all planes z,1604,1594; wait 10;</div><div class="">~disp #1;</div><div class="">volume #2-5 region all;</div><div class="">
<div style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none; caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0);">------------------------------------------------------<br class="">Dr. Edoardo D'Imprima<br class="">Postdoctoral fellow<br class="">Structural and Computational Biology Unit<br class="">EMBL Heidelberg - Mahamid Group<br class="">Meyerhofstraße 1<br class="">69117 Heidelberg<br class="">Germany<br class=""><br class="">Phone: +49 6221 387-8531<br class=""></div><span style="caret-color: rgb(0, 0, 0); color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0px; text-decoration: none;"></span><br class="Apple-interchange-newline"><span><img apple-inline="yes" id="8559E48A-A76E-4CA1-BEEE-13F3AC0053FB" src="cid:5c6ab8d1e07d81264d7b9723c4334399" class=""></span>
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