<html><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div dir="ltr" class=""><div class="">Hello,</div><div class=""><br class=""></div><div class="">I have a <b class="">text file list</b> of 30-40 maps from emdb that I would like to download and save using chimeraX. Each map should be named for example 5995.mrc, where 5995 is the actual EMDB id. Is there a way to do this using CLI to make it faster than downloading 1 by 1? I am not sure how to instruct chimeraX to take the file name from the open models.</div><div class=""><br class=""></div><div class="">open 5995 from emdb #opens the file and assigns #1</div><div class="">save ???.mrc models #1 #save the model 1 but how to instruct chimerax to take the model's name<br class=""></div><div class=""></div><div class=""><br class=""></div><div class="">Ideally would be something like this:</div><div class=""><br class=""></div><div class=""><div class="">Input: emdb-ID.txt</div><div class="">Output: 40 single .mrc maps named according to their EMDBIDs.</div></div><div class=""><br class=""></div><div class=""><br class=""></div><div class="">open emdb-ID.txt from emdb</div><div class="">save all, models #1-40 name=????<br class=""></div><div class=""><br class=""></div><br class=""><div class=""></div><div class="">Please let me know if I can implement this.</div><div class=""><br class=""></div><div class="">Thank you and best regards,</div><div class=""><br class=""></div><div class=""><div class=""><div class=""><div dir="ltr" class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr" class="">Nebojša Bogdanović, Ph.D<div class="">Department of Physiology and Biophysics,</div><div class="">School of Medicine,</div><div class="">Case Western Reserve University</div></div></div></div></div></div></div>
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