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<p class="MsoNormal"><span lang="EN-US" style="font-size:10.5pt;font-family:DengXian">Hi Dr. Meng,
<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.5pt;font-family:DengXian"><br>
Yes, this helps. <o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.5pt;font-family:DengXian"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.5pt;font-family:DengXian">I can open multiple files now, but I cannot open them in the order I want. I rename them with only numbers which corresponds to the frame number of each map, how can I read
them in such numbered order? Should I rename all the file exactly as in the vseries says: _<i>stachxxxx</i>_.dx? In which xxxx represents index of frames?<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.5pt;font-family:DengXian"><br>
Best,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.5pt;font-family:DengXian">Tianming<o:p></o:p></span></p>
<div style="border:none;border-top:solid #B5C4DF 1.0pt;padding:3.0pt 0cm 0cm 0cm">
<p class="MsoNormal" style="margin-bottom:12.0pt"><b><span style="color:black">发件人</span></b><b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">:</span></b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> Elaine
Meng <meng@cgl.ucsf.edu><br>
</span><b><span style="color:black">日期</span></b><b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">:</span></b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">
</span><span style="color:black">星期二</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">, 2022</span><span style="color:black">年</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">10</span><span style="color:black">月</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">11</span><span style="color:black">日</span><span style="font-family:"Calibri",sans-serif;color:black">
</span><span style="color:black">下午</span><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">5:29<br>
</span><b><span style="color:black">收件人</span></b><b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">:</span></b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> Tianming Qu <tqu@fsu.edu><br>
</span><b><span style="color:black">抄送</span></b><b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">:</span></b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> chimerax-users@cgl.ucsf.edu <chimerax-users@cgl.ucsf.edu><br>
</span><b><span style="color:black">主题</span></b><b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black">:</span></b><span lang="EN-US" style="font-family:"Calibri",sans-serif;color:black"> Re: [chimerax-users] Loading density files<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><span lang="EN-US" style="font-size:11.0pt">Hi Tianming,<br>
If the maps are on the same grids as each other, i.e. their outline boxes would be the same and they have the same number of grid points with same spacing, they can be opened as a "volume series" -- then you can play the series with the "vseries play" command
or interactively using a slider interface shown with "vseries slider":<br>
<br>
Volume series and how to open the files so that they are interpreted as series:<br>
<https://urldefense.com/v3/__https://rbvi.ucsf.edu/chimerax/docs/user/trajectories.html__;!!PhOWcWs!yxSAQG3kbRGnwkST8hops7zzv_ki2MvLq6pq-Fee1F6GgKUdW4nrbeYQ2XGAa1bnpL8h8O7zgEqajQ$ ><br>
<br>
You might need to name the files a certain way so that you can specify them in a single "open" command. See "open" command "vseries" option:<br>
<https://urldefense.com/v3/__https://rbvi.ucsf.edu/chimerax/docs/user/commands/open.html*vseries__;Iw!!PhOWcWs!yxSAQG3kbRGnwkST8hops7zzv_ki2MvLq6pq-Fee1F6GgKUdW4nrbeYQ2XGAa1bnpL8h8O5tw59yjA$ ><br>
<br>
For playback after opening, see the "vseries" commands, including "vseries play" and "vseries slider":<br>
<https://urldefense.com/v3/__https://rbvi.ucsf.edu/chimerax/docs/user/commands/vseries.html__;!!PhOWcWs!yxSAQG3kbRGnwkST8hops7zzv_ki2MvLq6pq-Fee1F6GgKUdW4nrbeYQ2XGAa1bnpL8h8O7N3cUCFA$ ><br>
<br>
I hope this helps,<br>
Elaine<br>
-----<br>
Elaine C. Meng, Ph.D. <br>
UCSF Chimera(X) team<br>
Department of Pharmaceutical Chemistry<br>
University of California, San Francisco<br>
<br>
> On Oct 11, 2022, at 2:13 PM, Tianming Qu via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:<br>
> <br>
> Dear Chimerax developers:<br>
> <br>
> I have a lot of density files, is there anyway I can load them at the same time and view then like a protein traj?<br>
> <br>
> Best,<br>
> Tianming<o:p></o:p></span></p>
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