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Hi Everyone,</div>
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I ran AF2 multimer and have a two-chain complex. I ran the mlp command on the two chains separately and together. The two chains seem to interact via hydrophobic residues where chain B fits into a pocket on chain C. Here are the chain residues:</div>
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/b:72-124</div>
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/c:1-190</div>
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Is there any way to determine which residues (hydrophobic) in each of these two regions are interacting via hydrophobic interactions.</div>
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Thanks for any help you can provide.</div>
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<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0); background-color: rgb(255, 255, 255);" class="elementToProof">
Phil McClean</div>
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