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Greetings.</div>
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<br>
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We're having an issue savings session with ChimeraX 1.5. Trying to save a session file results in the following error:</div>
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[save] (help: user/commands/save.html) /data/processed/staggers/cryofib-
<div class="ContentPasted0">tryps/process/YTAT9-1 lamella4 0206 def -5 110e tilt-7/full seg session.cxs</div>
<div class="ContentPasted0">[save /data/processed/staggers/cryofib-</div>
<div class="ContentPasted0">tryps/process/YTAT9 - 1 lamella4 0206 def -5 110e tilt-7/full seg session.cxs] (cxcmd: save</div>
<div class="ContentPasted0">/data/processed/staggers/cryofib-</div>
<div class="ContentPasted0">tryps/process/YTAT9 - 1 lamella4 0206 def -5 110e tilt-7/full seg session.cxs)</div>
<div class="ContentPasted0">Traceback (most recent call last) :</div>
<div class="ContentPasted0">File</div>
<div class="ContentPasted0">"/opt/cryoem/chimerax-2022.10.28/lib/python3.9/site-</div>
<div class="ContentPasted0">packages/chimerax/core/session.py", line 285, in process</div>
<div class="ContentPasted0">data = sm. take snapshot (obj</div>
<div class="ContentPasted0">session,</div>
<div class="ContentPasted0">self.-state flags)</div>
<div class="ContentPasted0">File "/opt/cryoem/chimerax-2022.10.28/lib/python3.9/site-</div>
<div class="ContentPasted0">packages/chimerax/log/tool.py", line 542, in take snapshot</div>
<div class="ContentPasted0">"contents': self.page source,</div>
<div class="ContentPasted0">AttributeError:</div>
<div class="ContentPasted0">*Log' object has no attribute</div>
<div class="ContentPasted0">'page source'</div>
<div class="ContentPasted0">The above exception was the direct cause of the following exception:</div>
<div class="ContentPasted0">Traceback (most recent call last) :</div>
<div class="ContentPasted0">File "/opt/cryoem/chimerax-2022.10.28/lib/python3.9/site-</div>
<div class="ContentPasted0">packages/chimerax/core/session.py", line 262, in discovery</div>
<div class="ContentPasted0">self.processed[key] = self.process (obj, parents)</div>
<div class="ContentPasted0">File "/opt/cryoem/chimerax-2022.10.28/lib/python3.9/site-</div>
<div class="ContentPasted0">packages/chimerax/core/session.py",</div>
<div class="ContentPasted0">line 290, in process</div>
<div class="ContentPasted0">raise RuntimeError (msg) from e</div>
<div class="ContentPasted0">RuntimeError: Error while saving session data for</div>
<div class="ContentPasted0">"tools'</div>
<div class="ContentPasted0">-></div>
<div class="ContentPasted0">‹chimerax.core. tools. Tools object at 0x7f90efeb0310></div>
<div class="ContentPasted0">=></div>
<div class="ContentPasted0"><chimerax.log. tool. Log</div>
<div class="ContentPasted0">object at 0x7f90ee2b3c10></div>
<div class="ContentPasted0">During handling of the above exception, another exception occurred:</div>
<div class="ContentPasted0">Traceback (most recent call last) :</div>
<div class="ContentPasted0">File</div>
<div class="ContentPasted0">"/opt/cryoem/chimerax-2022.10.28/lib/python3.9/site-</div>
<div class="ContentPasted0">packages/chimerax/core/session.py", line 896, in save</div>
<div class="ContentPasted0">session. save (output, version=version, include maps=include maps)</div>
<div class="ContentPasted0">File "/opt/cryoem/chimerax-2022.10.28/lib/python3.9/site-</div>
<div class="ContentPasted0">packages/chimerax/core/session.py"</div>
<div class="ContentPasted0">line 625, in save</div>
<div class="ContentPasted0">mgr.discovery(self. state containers)</div>
<div class="ContentPasted0">File "/opt/cryoem/chimerax-2022.10.28/lib/python3.9/site-</div>
<div class="ContentPasted0">packages/chimerax/core/session.py", line 266, in discovery</div>
<div class="ContentPasted0">raise ValueError ("error processing: %S: %S" % ( obj stack(parents, obj),</div>
<div class="ContentPasted0">e))</div>
<div class="ContentPasted0">ValueError: error processing:</div>
<div class="ContentPasted0">"tools'</div>
<div class="ContentPasted0"><chimerax.core. tools. Tools object at</div>
<div class="ContentPasted0">0x7 f90efeb0310></div>
<div class="ContentPasted0"><chimerax.log. tool.Log object at 0x7f90ee2b3c10>: Error</div>
<div class="ContentPasted0">while saving session data for 'tools'</div>
<div class="ContentPasted0">-> <chimerax.core. tools. Tools object at</div>
<div class="ContentPasted0">0x7f90efeb0310></div>
<div class="ContentPasted0"><chimerax.log. tool. Log object at 0x7f90ee2b3c10></div>
<div class="ContentPasted0">BUG: ValueError: error processing:</div>
<div class="ContentPasted0">'tools'</div>
<div class="ContentPasted0">for</div>
<div class="ContentPasted0">"tools</div>
<div class="ContentPasted0">=></div>
<div class="ContentPasted0">-></div>
<div class="ContentPasted0">->: Error while saving session data</div>
<div class="ContentPasted0">File "/opt/cryoem/chimerax-2022.10.28/lib/python3.9/site-</div>
<div class="ContentPasted0">packages/chimerax/core/session.py"</div>
<div class="ContentPasted0">line 266, in discovery</div>
<div class="ContentPasted0">raise ValueError ("error processing: %S: %5" %</div>
<div class="ContentPasted0">(obj stack(parents, obj), e))</div>
See log for complete Python traceback.<br>
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