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Stel,</div>
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There is some ChimeraX developer info online, including a bundle tutorial and some API documentation, at
<a href="https://www.cgl.ucsf.edu/chimerax/docs/devel/index.html" id="LPNoLPOWALinkPreview">
https://www.cgl.ucsf.edu/chimerax/docs/devel/index.html</a></div>
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The current session object can be accessed through the Shell tool (Tools -> General -> Shell).
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Hope that helps,</div>
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Tony<br>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> ChimeraX-users <chimerax-users-bounces@cgl.ucsf.edu> on behalf of Stylianos Iliadis via ChimeraX-users <chimerax-users@cgl.ucsf.edu><br>
<b>Sent:</b> Wednesday, November 23, 2022 3:55 AM<br>
<b>To:</b> chimerax-users@cgl.ucsf.edu <chimerax-users@cgl.ucsf.edu><br>
<b>Subject:</b> [chimerax-users] Developing a ChimeraX bundle - accessing programmatically ChimeraX(GUI open) session</font>
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<div lang="en-GR" link="#0563C1" vlink="#954F72" style="word-wrap:break-word"><font color="BA0C2F">[EXTERNAL SENDER - PROCEED CAUTIOUSLY]</font><br>
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<p class="x_MsoNormal"><span lang="EN-US">Hello,</span></p>
<p class="x_MsoNormal"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal"><span lang="EN-US">I would like to develop a small bundle-plugin for automatically annotating residue labels in protein structures. I tried to access ChimeraX via command line when ChimeraX was running (GUI open) with an
<b>open</b>ed protein structure in order to study the structure objects hierarchy( chain ->residue ->atoms). This would help me understand it better and code accordingly. Unfortunately, I didn’t manage to do so.
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<p class="x_MsoNormal"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal"><span lang="EN-US">Could you please suggest me a way, a page or terminal where I could read more about the internal structure of ChimeraX and if possible to programmatically access a session when it’s running in ChimeraX.</span></p>
<p class="x_MsoNormal"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal"><span lang="EN-US">Kind regards,</span></p>
<p class="x_MsoNormal"><span lang="EN-US">Stel Iliadis</span></p>
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