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<p class="MsoNormal"><span style="font-size:11.0pt">Hi Dr. Meng,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt">I have the independent components calculated already, sorry I did not make myself clear. I am wandering if I can use ChimeraX to display the ICA results I got from my own calculation.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt">Best,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt">Tianming<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><b><span style="font-size:12.0pt;color:black">From:
</span></b><span style="font-size:12.0pt;color:black">Elaine Meng <meng@cgl.ucsf.edu><br>
<b>Date: </b>Wednesday, February 8, 2023 at 11:33 AM<br>
<b>To: </b>Tianming Qu <tqu@fsu.edu><br>
<b>Cc: </b>Tianming Qu via ChimeraX-users <chimerax-users@cgl.ucsf.edu><br>
<b>Subject: </b>Re: [chimerax-users] About plotting independent component analysis vectors<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><span style="font-size:11.0pt">Hi Tianming,<br>
I do not know which calculation you are talking about. As far as I know, ChimeraX does not have any option to calculate independent components from an MD trajectory.
<br>
Best,<br>
Elaine<br>
-----<br>
Elaine C. Meng, Ph.D. <br>
UCSF Chimera(X) team<br>
Department of Pharmaceutical Chemistry<br>
University of California, San Francisco<br>
<br>
> On Feb 8, 2023, at 8:00 AM, Tianming Qu via ChimeraX-users <chimerax-users@cgl.ucsf.edu> wrote:<br>
> <br>
> Dear all, <br>
> <br>
> Is there any way I can display the eigenvectors I got from the independent component analysis on ChimeraX, which is calculated from the protein MD trajectory.<br>
> <br>
> Best,<br>
> Tianming<o:p></o:p></span></p>
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