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<p class="MsoNormal"><span lang="FR" style="font-size:14.0pt;mso-fareast-language:EN-US">Fantastic !!<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="FR" style="font-size:14.0pt;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="FR" style="font-size:14.0pt;mso-fareast-language:EN-US">Thanks<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:14.0pt;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><span style="font-size:13.5pt;font-family:Helvetica;color:black">—<br>
Prof. Cedric Govaerts, Ph.D.<br>
Universite Libre de Bruxelles<br>
Campus Plaine. Phone :+32 2 650 53 77<br>
Building BC, Room 1C4 203<br>
Boulevard du Triomphe, Acces 2<br>
1050 Brussels<br>
Belgium<br>
http://govaertslab.ulb.ac.be/<o:p></o:p></span></p>
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<b><span style="font-size:12.0pt;color:black">From: </span></b><span style="font-size:12.0pt;color:black">Elaine Meng <meng@cgl.ucsf.edu><br>
<b>Date: </b>Tuesday, 14 February 2023 at 17:35<br>
<b>To: </b>GOVAERTS Cédric <Cedric.Govaerts@ulb.be><br>
<b>Cc: </b>chimerax-users@cgl.ucsf.edu <chimerax-users@cgl.ucsf.edu><br>
<b>Subject: </b>Re: [chimerax-users] Colouring clipping plane<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">Hi Cedric!<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">In the Models panel, use the disclosure triangles and expand until you can see the surface cap model (see attached image) -- there will be a square color well for that model, in
the column between the ID and the "eye" (show/hide). Click that color well and it should bring up your system color-editor. Then when you choose the color in that dialog it will replace the electrostatic coloring on the cap.<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">I hope this helps,<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">Elaine<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">-----<br>
Elaine C. Meng, Ph.D. <br>
UCSF Chimera(X) team<br>
Department of Pharmaceutical Chemistry<br>
University of California, San Francisco<br>
<br>
<br>
<img width="501" height="140" style="width:5.2187in;height:1.4583in" id="_x0037_68D5B8D-137B-45DB-A7B7-B1702000C840" src="cid:61C22175-358B-40E7-A7E4-D052D4A4F04D"><o:p></o:p></span></p>
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<br>
<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:11.0pt">On Feb 14, 2023, at 7:36 AM, GOVAERTS Cédric via ChimeraX-users <chimerax-<a href="mailto:users@cgl.ucsf.edu">users@cgl.ucsf.edu</a>> wrote:<br>
<br>
Hi ChimeraX team.<br>
<br>
I’m trying to get an image of a protein whose surface is colored by electrostatic properties but clipped halfway.<br>
I would like the clipping plane to be white, not red/blue according to the electrostativ properties of the residues insides the protein.<br>
However, I don’t’ seem to be able to do that.<br>
<br>
-If I color everything white and then click on Molecular-Display “electrostatic”, the clipping plane also gets the electrostatic coloring<br>
<image001.png><br>
<br>
-If I color everything white and then click on Molecular-Display “hydrophobic” or “rainbow” it works, the clipping plane remains white.<br>
<image002.png><br>
<br>
Can you help me getting the white clipping plane with electrostatic surface ?<br>
<br>
Thanks a bunch<br>
<br>
Cedric<br>
<br>
—<br>
Prof. Cedric Govaerts, Ph.D.<br>
Universite Libre de Bruxelles<br>
Campus Plaine. Phone :+32 2 650 53 77<br>
Building BC, Room 1C4 203<br>
Boulevard du Triomphe, Acces 2<br>
1050 Brussels<br>
Belgium<br>
<a href="https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fgovaertslab.ulb.ac.be%2F&data=05%7C01%7CCedric.Govaerts%40ulb.be%7C1ad282da5f924ac9cb1908db0ea96fb5%7C30a5145e75bd4212bb028ff9c0ea4ae9%7C0%7C0%7C638119893125316030%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=JX%2BaAkY%2FUorrEndLWbfMSt7o4CUIWLeRngGhLU69iYw%3D&reserved=0">http://govaertslab.ulb.ac.be/</a><br>
<br>
<br>
<br>
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Manage subscription:<br>
https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users<o:p></o:p></span></p>
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