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Module: commonGeom FindHBond/commonGeom.py

Imported modules   
import base
from chimera import cross, angle, Vector, Point
Functions   
getPhiPlaneParams
project
sulphurCompensate
testPhi
testTheta
  getPhiPlaneParams 
getPhiPlaneParams (
        acceptor,
        bonded1,
        bonded2,
        )

Exceptions   
ValueError, "Wrong number of grandchild atoms" " for phi/psi acceptor %s" % acceptor.oslIdent()
  project 
project (
        point,
        normal,
        D,
        )

  sulphurCompensate 
sulphurCompensate ( baseR2 )

  testPhi 
testPhi (
        dp,
        ap,
        bp,
        phiPlane,
        phi,
        )

  testTheta 
testTheta (
        dp,
        donorHyds,
        ap,
        theta,
        )


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