Table of Contents

Class: MAViewer MultAlignViewer/MAViewer.py

MAViewer displays a multiple alignment

Base Classes   
ModelessDialog
Methods   
Hide
Quit
__init__
addSpecials
customUI
delSpecials
destroy
emHide
emName
emQuit
emRaise
fillInUI
readFile
realign
save
  Hide 
Hide ( self )

  Quit 
Quit ( self )

  __init__ 
__init__ (
        self,
        fileName,
        fileType=None,
        autoAssociate=1,
        quitCB=None,
        )

  addSpecials 
addSpecials ( self,  specials )

  customUI 
customUI ( self,  parent )

Function to allow customization of the interface

parent is the interior frame of the dialog. It can be populated with custom widgets as desired. A frame should be returned by this function, in which the MAViewer UI will be placed.

  delSpecials 
delSpecials ( self,  specials )

  destroy 
destroy ( self )

  emHide 
emHide ( self )

Extension manager method

  emName 
emName ( self )

Extension manager method

  emQuit 
emQuit ( self )

Extension manager method

  emRaise 
emRaise ( self )

Extension manager method

  fillInUI 
fillInUI ( self,  parent )

  readFile 
readFile (
        self,
        fileName,
        fileType,
        )

Exceptions   
IOError, "Found no sequences in file %s" % fileName
  realign 
realign (
        self,
        input,
        fileType=None,
        )

Switch to a different alignment of the same sequences

input is list of Sequences or file name

  save 
save ( self )


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This document was automatically generated on Tue Nov 5 16:56:32 2002 by HappyDoc version 2.0.1