# # Chimera command script showing green fluorescent protein (PDB 1gfl) # # input file: 1gfl (fetched from PDB) # # Movie-making commands commented out with ## # Recording a movie will slow replay of the script, but this will not # affect the replay rate of the resulting movie file. # 2dlabels create lab1 text 'Green Fluorescent Protein' color light sea green size 26 xpos .03 ypos .92 visibility show open 1gfl; del ~ :.a; window; linewidth 3; scale 1.6; rainbow; wait ##movie record wait 50 chain @n,ca,c,o; wait 1 wait 50 ~disp; ribbon 2dlabels change lab1 visibility hide frames 90; wait 2dlabels delete lab1 roll y 1 180; wait ribrepr edged roll y 1 180; wait ribrepr smooth roll y 1 80; wait ribbackbone; repr sphere :1.a,230.a@ca; color white,a :1.a,230.a@ca; disp :1.a,230.a@ca roll y 1 90; wait scale 1.015 20; wait disp :65-67.a; color byatom :65-67.a; repr cpk :65-67.a; wait 1 clip hither -1 20; wait wait 100 clip hither 1 20; wait scale 0.98 10; wait disp :99.a,153.a,163.a,167.a,202.a,203.a,222.a;repr bs :99.a,153.a,163.a,167.a,202.a,203.a,222.a; ribrepr flat wait 25 roll y 1 180; wait ##movie stop ##movie encode mformat mov output /MyPath/mymovie.mov