[Chimera-users] matchmaker command

[Haas, Ryan Matthew]

Dear Chimera Users,

  How does the matchmaker command perform its superposition?  Is it a
C-alpha superposition, or just backbone atoms, or all atoms?  Is it
appropriate to use these RMSD values obtained from "mmaker" in a
manuscript?

 

Help is greatly appreciated.

 

 Matthew Haas

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