[Chimera-users] Fwd: chimera to rebuild crystal

Eric Pettersen pett at cgl.ucsf.edu
Thu Jan 11 17:18:41 PST 2007


Hi Tom,
	Brady's question below seems more up your alley somehow.  It also 
seems like one of those things that should be cross-posted to the 
chimera-users or -dev lists for "community building" purposes, though 
I'll leave that up to your discretion.

--Eric

Begin forwarded message:

> From: "Brady Bernard" <bradyb at u.washington.edu>
> Date: January 11, 2007 5:06:21 PM PST
> To: "Eric Pettersen" <pett at cgl.ucsf.edu>
> Subject: chimera to rebuild crystal
>
> hi,
>  
> i am interested in using distance-dependent statistics in a scoring 
> function and i would like more than the default 3x3x3 repeating units 
> to rebuild a crystal using cryst1 data in pdb files.  how can i do 
> this with chimera?  i will need to do this for thousands of files and 
> am familiar with scripting and using the -nogui option with cmd files, 
> etc.
>  
> thanks in advance for your help,
>  
> brady bernard
> uw bioengineering
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