[Chimera-users] Delphi calculation for electrostatic surface potential

[Elaine Meng]

Hi Shensuke,
Chimera does not calculate electrostatic potential.  The  
DelPhiController tool works with the delphi program, but you have to  
get the delphi program separately from the Honig group.  Here is more  
information, including how to use that tool after you get DelPhi:
http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/ 
delphicontroller/delphicontroller.html

Best,
Elaine
-----
Elaine C. Meng, Ph.D.                          meng at cgl.ucsf.edu
UCSF Computer Graphics Lab and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco
                      http://www.cgl.ucsf.edu/home/meng/index.html




On Jun 17, 2007, at 10:50 PM, Shunsuke Meshitsuka wrote:

> Dear Doctors,
>
> I want to calculate surface potential by Delphi type calculation.
> I have tried from Menu bar,
> tool ---  DelPhi
> ,but  have not obtained the results.
>
> Please let me know the way to use them for the calculation of surface
> potentials from a PDB fie  in linux version of chimera-1.2417.
>
>
> Shunsuke Meshitsuka D.Sci., D.Med.
>
> Tottori University Graduate School of Medical Science
> Institute of  Regenerative Medicine and Biofunction,
> Division of Integrative Bioscience
> 86　Nishimachi Yonago Tottori　683-8503　Japan
> tel +81-859-38-6422 fax +81-859-38-6423
> Email: mesh at grape.med.tottori-u.ac.jp
>
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