[Chimera-users] import GRID contour map

Anindito Sen as2dz at cms.mail.virginia.edu
Fri Aug 1 11:46:23 PDT 2008


Hi Sebastian

You can convert the your contour map to Chimera supported file format (like 
.mrc or .map) using
"bimg" of the BSOFT package ( http://lsbr.niams.nih.gov/bsoft/

For more details contact - Bernard Heymann of BSOFT
Bernard  Heymann, Ph.D.

E-mail: heymannb at mail.nih.gov

Andy



On Thu, 31 Jul 2008 19:11:26 +0200
  "Sebastian Kruggel" <kruggel at chemie.uni-hamburg.de> wrote:
> Hi All,
> 
> 
> 
> I try to import a contour map generated with GRID and saved as *.grd or
> *.cnt file. 
> 
> Trying to open th e*.grd file in chimera I get the error message
> 
> 
> 
> Opening I:\strukturen\prep_modTemp\1j1b_DRY.grd
> 
> I:\strukturen\prep_modTemp\1j1b_DRY.grd: UHBD file does not contain 
>integer
> value 1 at bytes 96-99
> 
> using either little or big endian byte order. Found 46146
> 
> Done opening I:\strukturen\prep_modTemp\1j1b_DRY.grd
> 


On Thu, 31 Jul 2008 19:11:26 +0200
  "Sebastian Kruggel" <kruggel at chemie.uni-hamburg.de> wrote:
> Hi All,
> 
> 
> 
> I try to import a contour map generated with GRID and saved as *.grd or
> *.cnt file. 
> 
> Trying to open th e*.grd file in chimera I get the error message
> 
> 
> 
> Opening I:\strukturen\prep_modTemp\1j1b_DRY.grd
> 
> I:\strukturen\prep_modTemp\1j1b_DRY.grd: UHBD file does not contain 
>integer
> value 1 at bytes 96-99
> 
> using either little or big endian byte order. Found 46146
> 
> Done opening I:\strukturen\prep_modTemp\1j1b_DRY.grd
> 
> 
> 
> With *.cnt I get ‘file not found’, because file is supposed to be a *.bmp.
> 
> 
> 
> Does anybody have an idea, how to open my nice GRID contour map?
> 
> Greetings
> 
> Sebastian
> 
> 
> 
> 
> 
> --
> 
> 
> 
> Sebastian Kruggel
> 
> Institut für Pharmazie
> 
> Raum 112 
> Bundesstr.45 
> D 20146 Hamburg
> 
> Tel. +49(0)40 42838 3626
> 
> 
> 

Dr. Anindito Sen (Ph.D)
Research Associate , Dept. of Biochemistry and Molecular Genetics University 
of Virginia
Box 800733 Charlottesville, VA 22908



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