[Chimera-users] Volume viewer negative isosurface

Miguel Ortiz-Lombardía ibdeno at gmail.com
Mon Jun 2 02:28:14 PDT 2008


Hi,

I'm using Chimera 1.2509 for X11 on a G4 iBook running OSX.4.11

I have a problem with Volume Viewer to visualize an electrostatic potential
map calculated with APBS. The same potential map can be used without trouble
to color a molecular surface.

The problem is that when I try to set a negative isosurface to a negative
value, the box that contains map also gets colored, making the scene
unclear. I'm attaching a picture to illustrate this effect. I have tried to
change several settings but so far unsuccessfully...

Thanking you in advance for your help,


Miguel
-- 
http://www.pangea.org/mol/spip.php?rubrique2
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Je suis de la mauvaise herbe,
Braves gens, braves gens,
Je pousse en liberté
Dans les jardins mal fréquentés!
Georges Brassens
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