[Chimera-users] examples of python scripts

[Eric Pettersen]

Hi Bala,
	I've attached 5 scripts I've written over the last few months.  Their  
functions are:

1) show anisotropic ellipsoids on selected atoms
2) print cis peptides to reply log
3) measure atom distance or atom-atom angle to a plane
4) drive the chi angles of a selected residue in 10 degree increments  
and write the clashes to files
5) measure the minimum distance of single-character chain residues  
(i.e. no het, water) to a selection (typically a ligand)

Which ones are which should be obvious from the file names I think.

--Eric

On Feb 11, 2009, at 8:25 AM, Bala subramanian wrote:

> Dear Chimerians,
>
> Can someone help me by providing examples of python scripts written  
> for analyzing structures inside chimera. I have seen the chimera  
> programmers guide but i need some more scripts written for different  
> tasks to understand the way of accessing certain residues or atoms  
> in a structure and extracting its attributes etc.
>
> Cheers,
> Bala

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