[Chimera-users] Query regarding Ksdssp assignment
Arun Prasad Pandurangan
a.pandurangan at mail.cryst.bbk.ac.uk
Thu Jul 14 08:52:23 PDT 2011
Dear Users and Developers,
I would like to know whether its possible to retrieve the full secondary
structural assignment using Ksdssp within Chimera. For instance, I would
like to know all the strands that belong to a beta sheet. If I am right,
running Ksdssp from Chimera only gives details of the strand (using
isStrand) and helix (using isHelix) assignment and not about sheet
information. Using the full output of an another program DSSP, I am able
deduce which strands belongs to which sheets. I would like to know
whether similar kind of detailed output is available from Ksdssp as
well. If so how to retrieve those information within Chimera?
Looking forward for the advices. Thank you.
with best regards,
Arun Prasad
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