[Chimera-users] Double coordinates for same residue

[Francesco Pietra]

At any event I am at Debian GNU-Linux. In the meantime I came across a
possible solution that should work on both Linux and Darwin, although
it does not take account of the occupancy values. Probably, however,
in the case I am interested in, the occupancy values are not too
dissimilar (have to check), otherwise the authors would have not
published so many alternate locations.

http://www.biopython.org/wiki/Remove_PDB_disordered_atoms

francesco

On Thu, Sep 15, 2011 at 6:35 PM, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> Hmm, that's very puzzling to me -- I'm using a Mac now and I tested exactly that before replying!
> Elaine
>
> for example:
> open 2fma
> disp
> focus :170
> ~disp @.b
> (or, ~disp :170 at .b)
>
> On Sep 15, 2011, at 9:28 AM, Hurt, Darrell (NIH/NIAID) [E] wrote:
>
>> Hi everyone,
>>
>> It is my experience with Chimera on a Macintosh computer that the
>> alternate designation must be case-sensitive. In other words:
>>
>> ~disp :42 at .b
>> - will NOT undisplay alternate location B atoms in residue 42
>>
>> ~disp :42 at .B
>> - will undisplay alternate location B atoms in residue 42
>>
>> YMMV,
>> Darrell
>
>