[Chimera-users] Hydrogen Bond numbers

Dustin Park dpark61 at illinois.edu
Wed Apr 11 13:32:10 PDT 2018


Hello,

After using autodock and obtaining the HBonds, it seems that if I run the
simulation with the exact same parameters for receptor search volume, the
HBonds numbers change along with some other information. I have added the
file images to show. Is this supposed to be happening or is this a user
error?


First run:

Second Run with same parameters:



Thank you!

-- 
Dustin Park
University of Illinois Urbana-Champaign (M. Eng - Bioengineering)
Mobile: *224.623.3626*
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20180411/153a8977/attachment.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: image.png
Type: image/png
Size: 515660 bytes
Desc: not available
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20180411/153a8977/attachment.png>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: image.png
Type: image/png
Size: 771021 bytes
Desc: not available
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20180411/153a8977/attachment-0001.png>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: image.png
Type: image/png
Size: 515660 bytes
Desc: not available
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20180411/153a8977/attachment-0002.png>


More information about the Chimera-users mailing list