[Chimera-users] Output of distance measurements

Marco Sette sette at uniroma2.it
Sat Jan 13 13:27:19 PST 2018


Thanks Elaine and Eric,

it works fine :)

Best

Marco


Il 11/01/2018 20:23, Eric Pettersen ha scritto:
> To use Elaine’s suggestion you have to use the Save button on the 
> Reply Log, not the Save button on the Distances dialog.  The only way 
> to get blanks lines in that is to change Chimera’s Python code.
>
> —Eric
>
> Eric Pettersen
> UCSF Computer Graphics Lab
>
>
>> On Jan 11, 2018, at 10:07 AM, Elaine Meng <meng at cgl.ucsf.edu 
>> <mailto:meng at cgl.ucsf.edu>> wrote:
>>
>> Hi Marco,
>> If you put the command
>>
>> echo
>>
>> between the distance commands, it will put a blank line in the Log. 
>> It worked when I tried it, at least!
>> Best,
>> Elaine
>> -----
>> Elaine C. Meng, Ph.D.
>> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
>> Department of Pharmaceutical Chemistry
>> University of California, San Francisco
>>
>>> On Jan 11, 2018, at 2:17 AM, Marco Sette <sette at uniroma2.it 
>>> <mailto:sette at uniroma2.it>> wrote:
>>>
>>> Dear all,
>>>
>>> I have a very primitive script to measure distances, like
>>> distance :1.a at ha :5.b at ha
>>> distance :1.a at ha :4.b at ha
>>> distance ....
>>> etc.
>>> I run the script in File --> Open and get the distances in the 
>>> Structure Measurements panel and then Save.
>>> The output file list all the distances but, for my analysis, it 
>>> would be better to keep the lines separated by a blank line, or 
>>> something like this.
>>> Maybe this is possible by some change in my primtive script but I 
>>> have no idea...
>>>
>>> Thanks for your help,
>>> Marco
>>
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>

-- 
Dr.Marco Sette, Ph.D.
Department of Chemical Sciences and Technology
University of Rome, "Tor Vergata"
via della Ricerca Scientifica, 00133, Rome, Italy
e-mail: sette at uniroma2.it
e-mail: m77it at yahoo.it
Tel.: +39-0672594424
Fax: +39-0672594328
http://stc.uniroma2.it/?page_id=622&cn-entry-slug=marco-sette

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