[Chimera-users] Calculating surface for modified pdb file

김민재 kjh950429 at gmail.com
Sat Sep 29 09:38:33 PDT 2018


Hi y'all,
I've been trying to calculate the surface area of a modified pdb file. It
is an extracted part from 3hgn. Although the file seems pretty small and
simple, I keep getting a miscalculation-due-to-huge-chain error message
from Chimera. I think it's because of the "WARNING: treat_rs_edge: third
atom not found for edge 7 9" lines that get recorded on the reply log.I'm
new to Chimera and using pdb files, so I would really appreciate advice on
how to solve this issue. I took everything in a screen shot below. I can
send anyone the actual files if they want to take a closer look.
Thanks.
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