[Chimera-users] Query about adding charge to ligand

Nirban Dey 19MSM0098 nirban.dey2019 at vitstudent.ac.in
Thu Apr 8 04:38:12 PDT 2021


Hello, I am a Masters student of VIT University India. I am using chimera
to prepare my ligand. In the add charge option I noticed that if my ligand
has negative or positive charge and I try to add AM1-BCC it gives error but
I can add Gasteiger charge. Even if I set charge to +0 for the ligands that
have charge like -1 or +1  and try to add  AM1-BCC it gives error. I want
to know what is the reason that Gasteiger charge can be added but AM1-BCC
cannot be added..Kindly help me in this regard.

Thanking You
Nirban
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