[Chimera-users] Can't open large .bild files

Hannah Bridges hrb at mrc-mbu.cam.ac.uk
Tue Jan 12 09:52:06 PST 2021


Thanks Elaine,

I tried that but unfortunately it didn't help . What is odd to me is 
that both chimera and chimerax can open mrc/ccp4 files that are 
substantially larger without too much trouble.

Best wishes

Hannah

On 05/01/2021 19:37, Elaine Meng wrote:
> Hi Hannah,
> I do not know the answer to your question, but suggest trying ChimeraX instead of Chimera.  ChimeraX reads the same bild format and is generally much better with large data.
>
> <https://www.rbvi.ucsf.edu/chimerax/>
> <https://www.rbvi.ucsf.edu/chimerax/download.html>
> <https://rbvi.ucsf.edu/chimerax/docs/user/formats/bild.html>
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
>> On Jan 5, 2021, at 6:23 AM, Hannah Bridges <hrb at mrc-mbu.cam.ac.uk> wrote:
>>
>> Hi all,
>> I would like to visualize in Chimera the orientations from some angdist.bild files output from relion. I am able to open some .bild files (up to ~5.6MB in size) but I get "not responding" from Chimera when I try to open .bild files ~10-70MB (lots of particles and high angular sampling). I tried on a machine with more RAM but it was the same. Any hints about how to open these or is it just not possible?
>> Best wishes
>> Hannah

-- 
Dr Hannah Bridges
Investigator Scientist
MRC Mitochondrial Biology Unit
The Keith Peters Building
University of Cambridge
Cambridge Biomedical Campus
Hills Road
Cambridge
CB2 0XY
United Kingdom

Telephone : 01223 252812



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