[Chimera-users] "Cartoon" command unrecognized

Dmitry Lyumkis dlyumkis at salk.edu
Tue Feb 1 08:40:05 PST 2022


Got it, thanks for the clarification. 
Best,
Dmitry

> On Feb 1, 2022, at 8:28 AM, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> 
> Hi Dmitry,
> Chimera and ChimeraX are two different programs -- you are looking at the ChimeraX documentation!
> 
> Chimera website
> <https://urldefense.com/v3/__https://www.rbvi.ucsf.edu/chimera/index.html__;!!GX6Nv3_Pjr8b-17qtCok029Ok438DqXQ!iXNmtqmedJd8FHU_e6exBQLJBOfV-L4Bks3X1nVYt7-xWkgintXzzMaKVn4oVMiL$ >
> 
> ChimeraX website
> <https://urldefense.com/v3/__https://www.rbvi.ucsf.edu/chimerax/index.html__;!!GX6Nv3_Pjr8b-17qtCok029Ok438DqXQ!iXNmtqmedJd8FHU_e6exBQLJBOfV-L4Bks3X1nVYt7-xWkgintXzzMaKVgCtLak6$ >
> 
> Both websites have "Download" in their quick links on the left side of the home page.  
> 
> If you want curved tube helices, you have to use ChimeraX:
> <https://urldefense.com/v3/__https://www.rbvi.ucsf.edu/chimerax/features.html*tubes__;Iw!!GX6Nv3_Pjr8b-17qtCok029Ok438DqXQ!iXNmtqmedJd8FHU_e6exBQLJBOfV-L4Bks3X1nVYt7-xWkgintXzzMaKVn6l1qJX$ >
> 
> Also, there is a separate mailing list chimerax-users at cgl.ucsf.edu if you want to ask questions specifically about ChimeraX.
> 
> Best,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
> 
>> On Jan 31, 2022, at 9:43 PM, Dmitry Lyumkis via Chimera-users <chimera-users at cgl.ucsf.edu> wrote:
>> 
>> Dear Chimera support, 
>> I am trying to display a protein as tubes, using the “cartoon” command. 
>> I am following some of the instructions here: 
>> https://urldefense.com/v3/__https://www.cgl.ucsf.edu/chimerax/docs/user/commands/cartoon.html*style__;Iw!!GX6Nv3_Pjr8b-17qtCok029Ok438DqXQ!iXNmtqmedJd8FHU_e6exBQLJBOfV-L4Bks3X1nVYt7-xWkgintXzzMaKVmxI9QV3$ 
>> However, I get “unrecognized command” when I enter “cartoon” on the command line. 
>> Could this be a version issue? My Chimera version is 1.15 (build 42258) 2020-12-18. 
>> Best, 
>> Dmitry 
>> 




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