[Chimera-users] Saving segmented regions from EM map not working

Shruthi Viswanath shruthi.viswanath at gmail.com
Mon Feb 21 20:27:19 PST 2022


Hello Chimera team,

We have a problem with saving segmented regions from EMD 2329 using Segger.
When we segment one of the 9 spokes from this EM map and try to do File ->
save selected regions to .mrc from the Segger window it displays a box
around the selected region (see screenshot) and the saved .mrc file just
shows a small blob and does not look like the original selected
region. Could it be because of the lower than usual density range of this
particular map?

Thanks very much

Shruthi
--
Shruthi Viswanath
Reader F (Assistant Professor), National Center for Biological Sciences
(NCBS)
GKVK, Bellary Road, Bangalore, India 560065
Tel: +91 80 6717-6152
Email: shruthiv at ncbs.res.in
Web: https://www.ncbs.res.in/faculty/shruthi
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