[Chimera-users] Move model with associated map?

Elaine Meng meng at cgl.ucsf.edu
Tue May 10 09:51:56 PDT 2022


Hi Oli,
Take a look at "matrixcopy" ... it may work for this purpose if the map wasn't moved separately from the atomic model prior to the matchmaker alignment.

<https://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/matrixcopy.html>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco




> On May 10, 2022, at 8:02 AM, Oliver Clarke via Chimera-users <chimera-users at cgl.ucsf.edu> wrote:
> 
> Hi all,
> 
> Is there any way to apply the same transformation used by matchmaker for alignment to a map?
> 
> I have two structures (map+atomic model) in different frames of reference. I would like to align one structure on the other, but also move the associated map in the same way. Is this possible?
> 
> Cheers
> Oli
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