[Chimera-users] [chimerax-users] xyz axis indicator

Xiang Zhang zx18 at mails.tsinghua.edu.cn
Tue Nov 1 04:28:24 PDT 2022


Thank you! Tristan,


That works! I've looked for this command for a long time using guide and Google.


Xiang


-----Original Messages-----
From:"Tristan Croll" <tcroll at altoslabs.com>
Sent Time:2022-11-01 17:02:37 (Tuesday)
To: "Xiang Zhang" <zx18 at mails.tsinghua.edu.cn>
Cc: "ChimeraX Users Help" <chimerax-users at cgl.ucsf.edu>, Chimera <chimera-users at cgl.ucsf.edu>
Subject: Re: [chimerax-users] [Chimera-users] xyz axis indicator


The command "cofr showPivot {true|false}" will show/hide the axis indicator.


-- Tristan


On Tue, Nov 1, 2022 at 4:53 AM Xiang Zhang via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:

Hi Meng,

Thanks! I used ChimeraX. I figured it out. It's due to reciprocal space that I was viewing. I changed the map to real space and then the indicator disappear.

Best,
Xiang


> -----Original Messages-----
> From: "Elaine Meng" <meng at cgl.ucsf.edu>
> Sent Time: 2022-10-31 23:47:02 (Monday)
> To: "Xiang Zhang" <zx18 at mails.tsinghua.edu.cn>
> Cc: Chimera <chimera-users at cgl.ucsf.edu>, "ChimeraX Users Help" <chimerax-users at cgl.ucsf.edu>
> Subject: Re: [Chimera-users] xyz axis indicator
>
> Hi Xiang,
> I am guessing you are using ISOLDE with ChimeraX (not Chimera) so I am cross-posting this question to the chimerax-users at cgl.ucsf.edu list.  I am not expert with ISOLDE so I am not sure about the answer.
> Best,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> > On Oct 30, 2022, at 10:58 PM, Xiang Zhang via Chimera-users <chimera-users at cgl.ucsf.edu> wrote:
> >
> > Hi all,
> >
> > I was wondering how I could hide the xyz indicator in the center of  window when I was viewing the X-ray density from mtz file? It only appears in crystal unit view mode but disappears in EM projection side view.
> >
> > Best,
> > Xiang
> > <1667192316818.png>_______________________________________________
> > Chimera-users mailing list: Chimera-users at cgl.ucsf.edu
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