[Chimera-users] Query regarding depth cueing

Elaine Meng meng at cgl.ucsf.edu
Tue Nov 22 08:37:46 PST 2022


Hi Prathvi,
I don't know how good it would look, but there are options to adjust depth-cueing in the ChimeraX lighting command
<https://rbvi.ucsf.edu/chimerax/docs/user/commands/lighting.html>

...that you could embed in the "perframe" command for gradual changes
<https://rbvi.ucsf.edu/chimerax/docs/user/commands/perframe.html>

It would require you to do some experimentation and reading about how to use perframe.

Chimera has analogous commands, where depthcue control is in the "set" command.
<https://www.rbvi.ucsf.edu/chimera/current/docs/UsersGuide/midas/set.html>
<https://www.rbvi.ucsf.edu/chimera/current/docs/UsersGuide/midas/perframe.html>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Nov 22, 2022, at 4:28 AM, Prathvi Singh via Chimera-users <chimera-users at cgl.ucsf.edu> wrote:
> 
> Hi Elaine,
> Is there a way to change the depth cueing gradually using command line in either chimera or chimeraX? If possible, then it would be a great way to emphasize on a specific part of the protein while making a chimera movie.




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