[chimerax-users] Equivalent of surface colour by radius in tools/Volume viewer of Chimera

Shabih Shakeel sshakeel at mrc-lmb.cam.ac.uk
Tue Apr 17 11:47:25 PDT 2018


Hi Elaine,

Thanks a lot for the information. 
Is it possible to calculate electrostatic potential within ChimeraX or load Delhpi files?

Thanks.

Regards,
Shabih

> On 17 Apr 2018, at 16:22, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> 
> Hi Shabih,
> Sorry, not yet.  There is coloring by map value and by zone (to match nearby atoms or markers), but coloring by distance (radial, topographic height) is not yet implemented in ChimeraX.
> <http://rbvi.ucsf.edu/chimerax/docs/user/commands/color.html>
> 
> Regards,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
> 
>> On Apr 17, 2018, at 4:35 AM, Shabih Shakeel <sshakeel at mrc-lmb.cam.ac.uk> wrote:
>> 
>> Hi,
>> In ChimeraX, is there an equivalent of surface colour by radius in tools/Volume viewer of Chimera? I would like to colour an EM density map of a virus from its centre to the outside of the capsid with direct colour range in ChimeraX.
>> Thanks.
>> Regards,
>> Shabih
> 





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