[chimerax-users] ChimeraX - Color by Electrostatic Potential

[Maurício Menegatti Rigo]

Got it! Thank you so much for your help!

Best,
Maurício Menegatti Rigo

Em sex, 14 de set de 2018 às 14:55, Elaine Meng <meng at cgl.ucsf.edu>
escreveu:

> Hi Maurício,
> Yes, with the ChimeraX color command, for example something like:
>
> color electrostatic #1 map #2  palette -10,red:0,white:10,blue
>
> …where the protein with surface is #1 and the DelPhi map is #2.
>
> There are other possible options, see:
> <http://rbvi.ucsf.edu/chimerax/docs/user/commands/color.html#map>
>
> You can open the DelPhi file in all the usual ways (File… Open or “open”
> command). We read the .phi files from the academic version.  Here are the
> known map types:
> <http://rbvi.ucsf.edu/chimerax/docs/user/commands/open.html#volume>
>
> When you open the map it may show isosurfaces, which you can hide by
> clicking the “eye” icon near the upper left corner of the Volume Viewer
> panel.
> <http://rbvi.ucsf.edu/chimerax/docs/user/tools/volumeviewer.html>
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> > On Sep 14, 2018, at 10:26 AM, Maurício Menegatti Rigo <
> mauriciomr1985 at gmail.com> wrote:
> >
> > Hi,
> > is there a way to color the protein surface according to Electrostatic
> Potential, just like we do with Chimera ("Electrostatic Surface coloring"
> under "Tools"). The input potential file was calculated with Delphi.
> > Thanks in advance,
> > Maurício Menegatti Rigo, Ph.D.
> > Brazil
>
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