[chimerax-users] RESMAP output superposition.

Elaine Meng meng at cgl.ucsf.edu
Thu Aug 15 11:18:38 PDT 2019


Hello,
Yes, ChimeraX and Chimera are different programs, and Python scripts for Chimera are not expected to work in ChimeraX.

Although I’m not aware of a script for ChimeraX that did all the same stuff as the Chimera one, I believe that in ChimeraX you can still open your original map (that was input to ResMap) and the local-resolution map (output from Resmap), and then color the surface of your original map by the values in the local-resolution map using the command “color sample”:

<http://rbvi.ucsf.edu/chimerax/docs/user/commands/color.html#map>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Aug 14, 2019, at 7:50 PM, chimerax-announce-owner at cgl.ucsf.edu wrote:
> 
> From: Shahid Khan <outlook_CD0472DE47DC92D6 at outlook.com>
> Subject: RESMAP output superposition.
> Date: August 14, 2019 at 7:33:59 PM PDT
> 
> Hello 
> The python script for mapping the RESMAP local resolution output does not work in ChimeraX. Has anybody modified it so that it does? Or written a new script with the same purpose for ChimeraX.
>  




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