[chimerax-users] ChimeraX equivalent to "Chimera web data"?
Ben Webb
ben at salilab.org
Wed Apr 1 11:29:20 PDT 2020
On 3/24/20 2:22 PM, Eric Pettersen wrote:
> I mentioned awhile back that I was working on a replacement for the
> Open/Save/DataFormat bundle_info tags. In the replacement scheme, this
> will be possible by specifying the ‘dataFormat’ keyword, /e.g./ open
> long-ass-url data pdb.
I see that in today's daily build this works (albeit with "open2"),
great! But I can't open an alignment in the same fashion:
open2 equally-long-url data pir
complains with "Invalid "dataFormat" argument".
open2 equally-long-url data NBRF/PIR
gives a syntax error (chimerax/seqalign/parse.py tries to exec "from
.io.readNBRF/PIR import read" which isn't valid Python). Is this code
still in flux or should I open a bug?
Ben
--
ben at salilab.org https://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
- Sir Arthur Conan Doyle
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