[chimerax-users] addh and phenix

[Daniel Asarnow]

Hi,
Seems like with NAG glycans the addh result is incompatible with phenix
real space refinement. It's easy enough to fix by deleting HD2 - the
offending hydrogen - manually.

I was wondering if anyone had an opinion about this, before I report a
phenix bug.

Error looks like:

Number of atoms with unknown nonbonded energy type symbols: 5
    "ATOM   2629  HD2 ASN A 362 .*.     H  "

(4 more similar lines).

Best,
-da
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