[chimerax-users] Antw: [EXT] Re: selection modes

[Elaine Meng]

Hi Philipp,
I don't think there is an ISOLDE for 1.0 yet.  If I look at the toolshed it says ISOLDE 1.05b "works with 0.93"

<https://cxtoolshed.rbvi.ucsf.edu/apps/chimeraxisolde>

Best,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Jun 18, 2020, at 1:18 AM, Philipp Milkereit <Philipp.Milkereit at vkl.uni-regensburg.de> wrote:
> 
> Dear Elaine,
> 
> thanks for your help!
> Your example does not work for me on ChimeraX 0.93 (2020-04-03) both on a Windows and a Linux sytem.  But after installing the new production version 1.0 the selection mode works indeed there on user defined selectors as expected, which is great!
> Apparently there should be also now versions of the Isolde plugin (1.0b5 ?) which are compatible with ChimeraX 1.0, so no reason anymore to stay with 0.93.. 
> 
> Best,
> 
> Philipp  
> >>> Elaine Meng <meng at cgl.ucsf.edu> 18.06.2020 01:15 >>>
> Hi Philipp,
> This works fine for me using the menu.  For example, start ChimeraX, then:
> 
> open 2gbp
> menu: Select... Structure... Secondary Structure... Strand
> menu: Select... Define Selector... (I gave it the name "mystrands")
> menu: Select... Clear
> menu: Select... Structure... Ligand
> menu: Select... Menu Mode... Add
> menu: Select... User-Defined Selectors... mystrands
> 
> Now both the ligand and strands are selected.  Also works if I use commands for any of those steps.  When you use the menu, the corresponding commands are echoed in the Log, and it actually works by running the commands, so it doesn't make sense that commands would work and the menu wouldn't.
> 
> Tested in version 1.0.
> 
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                      
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
> 
> > On Jun 17, 2020, at 1:11 PM, Philipp Milkereit <philipp.milkereit at vkl.uni-regensburg.de> wrote:
> >
> > Dear all,
> > 
> > is there a way to add user-defined selectors or named selections (command: name) to the current selection by choosing them from the Menu:Select or in the Basic Actions window? Changing to Menu_Mode:Add in Menu:Select seems not to have any effect on that. I think in Chimera1 named selections still could be added to the current selection using the „append“ selection mode. At the moment adding named selections to the current selection works for me in ChimeraX just with the command line „select add“ command.
> > 
> > Many thanks for your help,
> > 
> > Philipp Milkereit
> > 
> _______________________________________________
> ChimeraX-users mailing list
> ChimeraX-users at cgl.ucsf.edu
> Manage subscription:
> https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users