[chimerax-users] "zone" near MULTIPLE residues in ChimeraX

Elaine Meng meng at cgl.ucsf.edu
Tue Mar 3 12:14:42 PST 2020


Hi Steve,
With “volume zone” you can specify any set of atoms.

<https://www.rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#zone>

For example,

volume zone #3 near #2/A:54-56,75 range 5

The “volume zone” command is in the “see also” list on the page you were viewing;  I try to cross-reference each page with a list of related features, but sometimes the list is long and/or easy to skip over.
I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Mar 3, 2020, at 12:08 PM, Steve Chou <stevezchou at gmail.com> wrote:
> 
> Dear ChimeraX team,
> 
> I tried to use the zone command to display the atomic details and DENSITY near THREE residues of interest. These three residues are ligands and bind to the same place. 
> https://www.rbvi.ucsf.edu/chimerax/docs/user/commands/zone.html
> As the above manual said, the zone command can only display things near ONE residue. Is there a way to work around this? 
> Many thanks,
> Steve




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