[chimerax-users] Surface caps only colored interactively

Daniel Asarnow asarnow at msg.ucsf.edu
Wed Apr 7 18:27:04 PDT 2021


Hi,
I'm trying to generate a figure using several surfaces colored by map
values. If I clip a surface, and then color it, the caps have the
correct colors. However, when I do the same thing non-interactively,
the caps are uncolored. Am I doing something wrong?

view front.cut
color sample #1.1 map #1.2 palette cyanmaroon range 2.25,7.0
#surface dust #1.1 size 100
save front_cut.png pixelSize 0.1 transparentBackground true

Best,
-da


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