[chimerax-users] rmsd no fitting

Elaine Meng meng at cgl.ucsf.edu
Mon Apr 26 09:22:42 PDT 2021


Hi Fabian,
An "rmsd" command to do that was added to ChimeraX approximately Sept 18, 2020 according to the change log:
<https://www.rbvi.ucsf.edu/trac/ChimeraX/wiki/ChangeLog>

So this feature is not in the 1.1 production release, which was before that time.  You would need to get the newer daily build instead:
<https://www.rbvi.ucsf.edu/chimerax/download.html#daily>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco


> On Apr 26, 2021, at 8:54 AM, Fabian Glaser <fglaser at technion.ac.il> wrote:
> 
> Dear all,
> 
> I want to perform rmsd calculation but without fitting to compare docking poses results. 
> 
> In chimera I used rmsd, but in chimeraX no rmsd and no align works for me.
> 
> Can you please advice?
> 
> thanks!
> 
> Best,
> 
> Fabian
> 
> Fabian Glaser PhD
> 
> Bioinformatics Knowledge Unit - BKU
> The Lorry I. Lokey Center for Life Sciences and Engineering
> Technion - Israel Institute of Technology, Haifa, Israel
> Web https://lokey.technion.ac.il/bioinformatic-knowledge-unit/
> Tel +972 (0) 4 8293701




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