[chimerax-users] Question on result
Tom Goddard
goddard at sonic.net
Wed Dec 29 15:42:38 PST 2021
Hi Bing,
When an AlphaFold prediction completes it automatically loads the best predicted structure and puts in the ChimeraX log a message
AlphaFold prediction finished.
Results in ~/Download/ChimeraX/AlphaFold/prediction_3
If it does not load the structure and does not log this message than the prediction did not complete. To see why it did not complete you would look in the Google Colab AlphaFold panel that appeared when you started the prediction and inspect the messages logged there.
Tom
> On Dec 29, 2021, at 8:52 AM, Bing Xu via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
>
> Hello,
> I used chimerax to predict interaction of two proteins. After load the two protein sequencing and run Alfold prediction, I can not find the result. I check the download fold and there is no Chimerax in the fold. I am wondering how I can find my prediction results I do appreciate your help.
>
> Thanks,
>
> Bing Xu
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