[chimerax-users] video of digestion kinetics

Tynan A. Becker tabecker at alaska.edu
Mon Jan 18 10:32:55 PST 2021


Good morning,

I have kinetics data from the in vitro digestion of a protein by several 
enzymes.  For each enzyme, I have 8 time points with peptides that 
remain intact at that point of time (which also gives me the cleavage 
sites added between adjacent time points). I was trying to figure out to 
model this in Chimera, including being able to show the protein from 
multiple sides.  Looking online, I see that you have some videos with 
proteins showing alternate conformations.  Do you think it possible for 
me to show the */cleavage sites/* that develop sequentially over time in 
a specific protein as it is digested?

Thanks,

Tynan

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