[chimerax-users] Pseudobond in Metalloproteins

Rachael Coleman rec287 at cornell.edu
Mon May 17 14:44:21 PDT 2021


Hello!

I have recently switched over to using ChimeraX from PyMol and I'm really
enjoying it a lot! My one question that I haven't been able to figure out
is how to deal with pseudobonds in a heme-containing protein. I want
ChimeraX to treat the bond between the porphyrin N atoms and the Fe atoms
like a bond and not a pseudobond (so I want it to be half blue and half
orange to correspond to the colors of those atoms).

Is there an easy way to tell the program that a pseudobond is a bond?

Best,

Rachael Coleman

-- 
*Rachael E. Coleman*
PhD Candidate, Lancaster Group
Department of Chemistry and Chemical Biology
Cornell University
Ithaca, NY 14853
Pronouns: She, her, hers
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