[chimerax-users] measure neighboring distance of histidine side chain

HONG ZHAN hzhan3 at wisc.edu
Tue Apr 5 09:20:50 PDT 2022


Dear all,

I am interested to get a list of distances between histidine residues in my built model. Because I would like to see which crosslinker can potentially help to maintain the structure better during purification.

I have noticed that I can measure one residue in chain A to all other atoms in chain B using contact function, however, I want to get a list of distances between any histidine imidazole (neighboring distance), is there a way to do that in ChimeraX?

Super thanks in advance.

Best,
Hong
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