[chimerax-users] ChimeraX command for rmsd color range in angstrom

Dario Passos dariorj at gmail.com
Wed Apr 20 16:50:50 PDT 2022


Thank you, Elaine!
Dario

On Wed, Apr 20, 2022 at 8:04 AM Elaine Meng <meng at cgl.ucsf.edu> wrote:

> Hi Dario,
> This is explained in the palette documentation -- see the third method
> with value,color pairs:
>
> <
> https://rbvi.ucsf.edu/chimerax/docs/user/commands/color.html#palette-options
> >
>
> In your case, something like:
>
> color byattribute seq_rmsd  #1 palette 0,blue:3,white:6,red
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> > On Apr 19, 2022, at 9:05 PM, Dario Passos via ChimeraX-users <
> chimerax-users at cgl.ucsf.edu> wrote:
> >
> > Dear Chimera community,
> > does anyone know how to add a range of values for the rmsd colors in
> Chimera X? Something like this (below) in angstrom:
> >
> > => color byattribute seq_rmsd  #1 palette blue:white:red threshold 0:3;6
> >
> > Thanks,
> > Dario
>
>
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