[chimerax-users] How to get back to original view after running resfit

Rayees Mattoo rmattoo at stanford.edu
Wed Aug 17 18:23:37 PDT 2022


Hi Elaine,
Thanks. That is exactly what I wanted.
One more question. I built a model in coot and then I opened in chimeraX. The model in cartoon representation shows most of the helices and sheets as loops (snapshot attached). I was wondering if there is something wrong with my model or I need to do something in chimeraX to get the cartoon display right.

Best
Rayees
________________________________
From: Elaine Meng <meng at cgl.ucsf.edu>
Sent: Wednesday, August 17, 2022 5:18 PM
To: Rayees Mattoo <rmattoo at stanford.edu>
Cc: ChimeraX Users Help <chimerax-users at cgl.ucsf.edu>
Subject: Re: [chimerax-users] How to get back to original view after running resfit

Hi Rayees,
Depends on exactly what you mean by original view, but you can delete 2D labels, show all atoms, and turn off map zoning via GUI actions or commands, e.g. commands:

2dlab delete
show atoms
volume unzone

If you wanted how the structure looked when you first opened it (e.g. maybe it was shown as ribbons rather than atoms), then one way is command:

preset "initial styles" "original look"

If you wanted original positions/orientations, one way is command:

view orient; view initial

There are usually several different ways to do the same thing (menu or gui actions, or even different sets of commands with same net result).  I'm giving commands because it is a lot less typing than describing the other ways.  All of these commands have detailed help in the User Guide (menu: Help... User Guide).

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Aug 17, 2022, at 5:05 PM, Rayees Mattoo via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
>
> Hi,
> I am using resfit command. Is there a command or way to go back to the original view?
>
> Best,
> Rayees

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