[chimerax-users] Morph map parts transformation in a complex

Elaine Meng meng at cgl.ucsf.edu
Thu Aug 18 18:14:28 PDT 2022


Hi Hong,
As mentioned in the volume morph" help, 
<https://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#morph <https://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#morph>>

"the input maps should have the same grids: dimensions, spacing, and numbers of points. Note volume resample can be used to make a copy of one map that has the same grid as another."

Here is the "volume resample" help, with explanation that you can lose some resolution from resampling:
<https://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#resample <https://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#resample>>

There is also a "volume add" if you are just trying to put different parts together, rather than morphing:
<https://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#add <https://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#add>>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Aug 18, 2022, at 5:36 PM, HONG ZHAN via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
> 
> Dear user group, 
> 
> I am trying to do volume morph to transform different parts of a complex into another part of the same complex. Because I did drag and fit each segmented parts, the map positions are no longer the same and I have this error: Map positions are not the same. 
> 
> Is there a way to do the map morph to transform different map parts in the complex?
> 
> Many thanks!
> Hong

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