[chimerax-users] labeling of protein-ligand interactions

[Enrico Martinez]

Thank you very much Elaine!
Cheers,
Enrico

пн, 17 янв. 2022 г. в 20:48, Elaine Meng <meng at cgl.ucsf.edu>:

>
> Also, if you meant that you don't want any label on the ligand, then don't include it in the label command.  E.g. instead of
>
> label @@display
>
> ...you could limit to protein only:
>
> label @@display & protein
>
> Use of "&" and other combination symbols is explained here:
> <https://rbvi.ucsf.edu/chimerax/docs/user/commands/atomspec.html#combinations>
>
> I hope this helps,
> Elaine
>
> > On Jan 17, 2022, at 11:40 AM, Elaine Meng via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
> >
> > See the "label" documentation, e.g. use command "help label" or see the copy on our website here:
> >
> > <https://rbvi.ucsf.edu/chimerax/docs/user/commands/label.html>
> >
> > Probably you want  to try the "color" "height" and "attribute" options of that command.
> >
> > Elaine
> > -----
> > Elaine C. Meng, Ph.D.
> > UCSF Chimera(X) team
> > Department of Pharmaceutical Chemistry
> > University of California, San Francisco
> >
> >
> >> On Jan 17, 2022, at 9:25 AM, Enrico Martinez via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
> >>
> >> Dear ChimeraX users!
> >>
> >> I am working on the visualization of the protein-ligand interactions.
> >> The two below commands are used to visualize and label amino acids
> >> involved in the interactions with the ligand
> >> contacts #1.1 & ligand makePseudobonds false reveal true log true
> >> label @@display
> >>
> >> How could I increase the font size and change the colour of the
> >> displayed amino acid labels (like Tyr-188)? Is it possible to hide the
> >> name of the ligand which always appears after the label command?
> >> Many thanks in advance!
> >> Enrico
> >
> >
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