[chimerax-users] where can I find the mesh option in chimeraX?
Elaine Meng
meng at cgl.ucsf.edu
Thu Jun 23 09:14:36 PDT 2022
Sorry, my mail display did not make it clear that those files you attached were images.
These volume display options are not in a GUI currently, but they are all in the "volume" command, e.g. see
<https://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#dispsurf>
I hope this helps,
Elaine
> On Jun 23, 2022, at 9:10 AM, 王超 via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
>
> Dear Dr.Elaine
> Thanks for reply!
> But that is actrually not my point. I mean where to find the options like subdivide surface/surface smoothing iterations factor...(fig in the chimera)
> <2FFE1C7A at 3E6FA006.6690B462>
> ------------------ Original ------------------
> From: "Elaine Meng"<meng at cgl.ucsf.edu>;
> Date: Fri, Jun 24, 2022 00:02 AM
> To: "王超"<wangc at henu.edu.cn>;
> Cc: "chimerax-users"<chimerax-users at cgl.ucsf.edu>;
> Subject: Re: [chimerax-users] where can I find the mesh option in chimeraX?
>
> Hello,
> When you are showing volume data there is automatically a Volume Viewer panel included in the window. Near the right end of it above the histogram is a menu, probably says "surface" if the map is currently shown as a surface -- click on that to show menu and choose "mesh" instead.
>
> <E7CA1B6C at F6E5EE7A.6690B462.png>
>
> See ChimeraX Volume Viewer help
> <https://rbvi.ucsf.edu/chimerax/docs/user/tools/volumeviewer.html>
>
> Or you can use a command, e.g.
>
> volume all style mesh
>
> There are lots of options in the "volume" command
> <https://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#general>
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
>
>> On Jun 22, 2022, at 7:29 PM, 王超 via ChimeraX-users <chimerax-users at cgl.ucsf.edu> wrote:
>>
>> Dear All,
>> I want to setting the mesh option in ChimeraX like "Chimera way".
>> Like "open Volume Viewer of a map, and click features-data display option".
>> but I cannot find toolbar of Volume Viewer, I am puzzle where to find it?<2BF92685 at ECAE6D2D.01D0B362>
>> <2EFD1F7D at 22C8076A.01D0B362>
>
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